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Micro Array Data

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Expression Data の Micro Array Data をダウンロードできます。
このゲノムネットワークプラットフォームのデータを利用されて「論文発表」「研究発表」をなされた場合は、利用データの出典を明記するようにお願いします。
[Human]
公開日付 データ名称 生物種 データ種別 ファイル名 形式 README ダウンロード
2010.5.19 THP-1細胞のPMA刺激時系列データ(Agilent)
(理研)
Human Expression
(Agilent microarray)
Agilent_THP-1_
10timepoints_data.xls
(1.2MB)
Excel Readme ダウンロード
2010.5.19 THP-1細胞のPMA刺激時系列データ(Illumina)
(理研)
Human Expression
(Illumina microarray)
Illumina_THP-1_RIKEN1_3_6_PMA_
10TimePoints.xls
(48MB)
Excel Readme ダウンロード
2010.5.19 THP-1細胞における転写因子Knock Downシリーズ1(Illumina)(理研) Human Expression
(Illumina microarray)
KD_data_1.xls
(150MB)
Excel Readme ダウンロード
2010.5.19 THP-1細胞における転写因子Knock Downシリーズ2(Illumina)(理研) Human Expression
(Illumina microarray)
KD_data_2.xls
(122MB)
Excel Readme ダウンロード
2010.5.19 THP-1細胞へのpre-miRNA導入データ(Illumina)
(理研)
Human Expression
(Illumina microarray)
Illumina_pre-miRNA.xls
(65MB)
Excel Readme ダウンロード
2010.5.19 THP-1細胞のPU.1 Knock Down data(Illumina)
(理研)
Human Expression
(Illumina microarray)
Illumina_PU.1_KD+
PMA_1_24.xls
(38MB)
Excel Readme ダウンロード
2010.5.19 Illumina microarray プローブ情報
(理研)
Human Expression
(Illumina microarray)
Human-6_v2_sequence.csv
(17MB)
Text - ダウンロード
2010.5.19 Affymetrix プローブ情報
(理研)
Human Expression
(Micro Array)
HG-U133_Plus_2_annot_csv.zip
(20MB)
Text(ZIP) Readme ダウンロード
2010.5.19 Affymetrix 発現量データ
(理研)
Human Expression
(Micro Array)
Scaled_THP-1_Affimetrix.zip
(1MB)
Text(ZIP) Readme ダウンロード
Reference

An atlas of combinatorial transcriptional regulation in mouse and man.

Ravasi T, Suzuki H, Cannistraci CV, Katayama S, Bajic VB, Tan K, Akalin A, Schmeier S, Kanamori-Katayama M, Bertin N, Carninci P, Daub CO, Forrest AR, Gough J, Grimmond S, Han JH, Hashimoto T, Hide W, Hofmann O, Kawaji H, Kubosaki A, Lassmann T, van Nimweg en E, Ogawa C, Teasdale RD, Tegnr J, Lenhard B, Teichmann SA, Arakawa T, Ninomiya N, Murakami K, Tagami M, Fukuda S, Imamura K, Kai C, Ishihara R, Kitaz ume Y, Kawai J, Hume DA, Ideker T, Hayashizaki Y.

http://dx.doi.org/10.1016/j.cell.2010.01.044

The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line

Suzuki H, Forrest ARR, Van Nimwegen E, Daub CO, Balwierz P, Irvine K, Lassman T, Ravasi T, Hasegawa Y, de Hoon M, Katayama S, Schroder K, Carninci P, Akalin A, Ando Y, Arner E, Asada M, Asahra H, Bailey T, Bajic V B, Bauer D, Beckhouse A, Bertin N, Bjorkegren J, Brombacher F, Bulger E, Chalk A M, Chiba J, Cloonan N, Dawe A, Dostie J, Engstrom P G, Essack M, Faulkner G J, Fink J, Fredman D, Fujimori K, Furuno M, Gojobori T, Gough J, Grimmond S, Gustafsson M, Hashimoto M, Hashimoto T, Hatakeyama M, Heinzel S, Hide W, Hofmann O, Hornquist M, Huminiecki L, Ikeo K, Imamoto N, Inoue S, Inoue Y, Ishihara R, Iwayanagi T, Jacobsen A, Kaur M, Kawaji H, Kerr MC, Kimura R, Kimura S, Kimura Y, Kitano H, Koga H, Kojima T, Kondo S, Konno T, Krogh A, Kruger A, Kumar A, Lenhard B, Lennartsson A, Lindow M, Lizio M, MacPherson C, Maeda N, Maher CA, Maqungo M, Mar J, Matigian NA, Matsuda H, Mattick JS, Meier S, Miyamoto S, Miyamoto-Sato E, Nakabayashi K, Nakachi Y, Nakano M, Nygaard S, Okayama T, Okazaki Y, Okuda-Yabukami H, Orlando V, Otomo J, Pachkov M, Petrovsky N, Plessy C, Quackenbush J, Radovanovic A, Rehli M, Saito R, Sandelin S, Schmeier S, SchoNnbach C, Schwartz AS, Semple CA, Sera M, Severin J, Shirahige K, Simons C, St. Laurent G, Suzuki M, Suzuki T, Sweet MJ, Taft RJ, Takeda S, Takenaka Y, Tan K, Taylor MS, Teasdale RD, TegneLr J, Teichmann S, Valen E, Wahlestedt C, Waki K, Waterhouse A, Wells CA, Winther O, Wu L, Yamaguchi K, Yanagawa H, Yasuda J, Zavolan M, Hume DA, Arakawa T, Fukuda S, Imamura K, Kai C, Kaiho A, Kawashima T, Kawazu C, Kitazume Y, Kojima M, Miura H, Murakami K, Murata M, Ninomiya N, Nishiyori H, Noma S, Ogawa C, Sano T, Simon C, Tagami M, Takahashi Y, Kawai J, Hayashizaki Y.

http://dx.doi.org/10.1038/ng.375

Tiny RNAs associated with transcription start sites in animals

Taft RJ, Glazov EA, Cloonan N, Simons C, Stephen S, Faulkner GJ, Lassmann T, Forrest ARR, Grimmond SM, Schroder K, Irvine K, Arakawa T, Nakamura M, Kubosaki A, Hayashida K, Kawazu C, Murata M, Nishiyori H, Fukuda S, Kawai J, Daub CO, Hume DA, Suzuki H, Orlando V,Carninci P, Hayashizaki Y, Mattick JS.

http://dx.doi.org/10.1038/ng.312

The regulated retrotransposon transcriptome of mammalian cells

Faulkner GJ, Kimura Y, Daub CO, Wani S, Plessy C, Irvine KM, Schroder K, Cloonan N, Steptoe AL, Lassmann T, Waki K, Hornig N, Arakawa T, Takahashi H, Kawai J, Forrest ARR, Suzuki H, Hayashizaki Y, Hume DA, Orlando V, Grimmond SM, Carninci P.
Nature Genetics, 41:5, 563-571 (2009)

http://dx.doi.org/10.1038/ng.368

The FANTOM Web Resource: from mammalian transcriptional landscape to its dynamic regulation

Kawaji H, Severin JM, Lizio M, Waterhouse AM, Katayama S, Irvine KM, Hume DA, Forrest ARR, Suzuki H, Carninci P, Hayashizaki Y, Daub CO.,

http://dx.doi.org/10.1186/gb-2009-10-4-r40